Tyson Whitehead
88833a0edd
firedrake: Bump version snapshot to a967a34
2018-01-14 09:19:56 -05:00
Tyson Whitehead
572953ff66
firedrake: Add meta information
2018-01-14 09:19:03 -05:00
Tyson Whitehead
adbd06e5b2
Merge branch 'firedrake' into 'master'
...
firedrake: Initial packaging
See merge request !4
2017-05-01 20:38:50 -04:00
Tyson Whitehead
a2f7eda6de
firedrake: Initial packaging
2017-05-01 20:09:09 -04:00
Tyson Whitehead
bcdbc895aa
Merge branch 'openslide' into 'master'
...
openslide: Initial packaging (includes python interface)
* Add upstream commit 4ea9211 for Pillow issue 2259
See merge request !3
2017-05-01 17:48:55 -04:00
Tyson Whitehead
c979c0fe6b
openslide: Initial packaging (includes python interface)
...
* Add upstream commit 4ea9211 for Pillow issue 2259
2017-05-01 17:40:26 -04:00
Tyson Whitehead
e0577fa54e
Merge branch 'meraculous' into 'master'
...
meraculous: Initial packaging
The example run given in the [manual](http://jgi.doe.gov/data-and-tools/meraculous ) ran okay. The `use_cluster` setting (i.e., the one that causes the `run_meraculous.sh` script to try and submit jobs to the cluster) doesn't work as the default scripts assume [SGE](https://en.wikipedia.org/wiki/Oracle_Grid_Engine ). Fixing that would require a lot of work.
See merge request !2
2016-12-22 15:52:25 -05:00
Tyson Whitehead
ee64d3347c
meraculous: Initial packaging
2016-12-22 15:44:49 -05:00
Tyson Whitehead
02dcc6b314
namd: Remove unneeded perl dependency
2016-11-28 14:36:37 -05:00
Tyson Whitehead
e2d17b0061
Merge remote-tracking branch 'namd/master' into namd
2016-11-28 14:09:42 -05:00
Tyson Whitehead
cbd2a47683
namd: Generalize of over specific version numbers
2016-11-28 13:54:44 -05:00
Tyson Whitehead
58985f7fa4
namd: Switch from custom builder to overloaded stages
2016-11-28 13:39:06 -05:00
Tyson Whitehead
aebc5cb499
namd: Change spacing to reflect nesting level
2016-11-28 12:00:44 -05:00
Tyson Whitehead
c1ff57dde6
namd: No need to delete stuff in build tree as it is thrown away at end
2016-11-28 11:53:52 -05:00
Tyson Whitehead
88e7f84803
namd: Move namd to standard lib/namd and symlink to bin
2016-11-28 11:50:37 -05:00
Tyson Whitehead
0fd01a6fb2
namd: Pass -f to tcsh to not process any rc files (helps nix-shell)
2016-11-28 11:42:08 -05:00
Tyson Whitehead
b8a764d2e8
namd: Include perl in buildInputs to put it in the path
2016-11-28 11:41:47 -05:00
Tyson Whitehead
7d44145df3
namd: Initial NAMD packaging by Pawel
2016-11-28 10:35:56 -05:00
Tyson Whitehead
9dcf69a9e8
Use --file to install directly instead of copying to ~/.nix-defexp
2016-11-21 16:33:52 -05:00
Tyson Whitehead
efb0b213e4
Merge branch 'openfoam' into 'master'
...
Openfoam expression
This adds an OpenFOAM nix expression. It
* provides binary wrappers that automatically source the *etc/bashrc* script before running, and
* provides *-mpi wrappers that automatically call the correct mpirun with `-n <num>` set by the partition.
It has been tested on goblin in both MPI and non-MPI mode on the [damBreak example](http://cfd.direct/openfoam/user-guide/damBreak ).
See merge request !1
2016-10-27 17:22:46 -04:00
Tyson Whitehead
a90c9e5ee3
openfoam: Add *-mpi wrappers for all bins that use libPstream.so
...
* Ensure correct mpirun is used and right number of processes
2016-10-27 15:21:59 -04:00
Tyson Whitehead
7a6534cb21
openfoam: Don't package applications directory (it's source)
2016-10-07 16:49:01 -04:00
Tyson Whitehead
96cd6a502e
openfoam: Drop unused buildInputs
2016-10-07 16:48:29 -04:00
Tyson Whitehead
ac43be430a
openfoam: Initial packaging
2016-10-07 15:53:07 -04:00
Tyson Whitehead
49e7640246
nltk: Initial packaging
2016-10-06 17:21:58 -04:00
Tyson Whitehead
c3ca12cbc0
Update SHARCNET git Nix URLs for creating of Nix group
2016-09-21 13:00:48 -04:00
Tyson Whitehead
b702d55c93
Description of how to use the Nix expressions
2016-05-18 12:24:32 -04:00
Tyson Whitehead
0130a56a01
sumo: Initial packaging
2016-05-17 23:55:47 -04:00
Tyson Whitehead
5b92a21007
cryptominisat: Initial packaging
2016-05-17 17:12:17 -04:00
