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minia: Initial packaging

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This commit is contained in:
Tyson Whitehead
2019-03-15 10:27:20 -04:00
parent 99a1f1b32b
commit 5dac1b30ad
2 changed files with 27 additions and 0 deletions
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2
pkgs/all-packages.nix
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@@ -22,6 +22,8 @@ self: super: pkgs: with pkgs; {
#meraculous = callPackage ./meraculous.nix { let stdenv49 = overrideCC stdenv gcc49; in stdenv = stdenv49; boost = boost159.override { stdenv = stdenv49 }; }; #meraculous = callPackage ./meraculous.nix { let stdenv49 = overrideCC stdenv gcc49; in stdenv = stdenv49; boost = boost159.override { stdenv = stdenv49 }; };
minia = callPackage ./minia.nix { };
inherit (callPackage ./opengl/default.nix { inherit super; }) mesa_noglu; inherit (callPackage ./opengl/default.nix { inherit super; }) mesa_noglu;
inherit (callPackages ./octopus/octopus.nix { stdenv = overrideCC stdenv gcc5; gfortran = gfortran5; }) octopus72; inherit (callPackages ./octopus/octopus.nix { stdenv = overrideCC stdenv gcc5; gfortran = gfortran5; }) octopus72;

25
pkgs/minia.nix Normal file
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@@ -0,0 +1,25 @@
{ stdenv, fetchFromGitHub, cmake, zlib }:
stdenv.mkDerivation rec {
name = "minia-${version}";
version = "3.2.0";
src = fetchFromGitHub {
owner = "GATB";
repo = "minia";
fetchSubmodules = true;
rev = "v${version}";
sha256 = "1kziky9hgys3fp8891vx2hskwg7zw49fbnq9zvc7pwmc7qskasli";
};
buildInputs = [
cmake
zlib
];
meta = with stdenv.licenses; {
description = "A short-read assembler based on a de Bruijn graph, capable of assembling a human genome on a desktop computer in a day.";
homepage = https://github.com/GATB/minia;
license = gpl3;
};
}