39 lines
958 B
Nix
39 lines
958 B
Nix
{ stdenv, fetchFromGitHub, ldc
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, python3, glibc, which, zlib }:
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stdenv.mkDerivation rec {
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version = "0.6.9";
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name = "sambamba-${version}";
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src = fetchFromGitHub {
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owner = "biod";
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repo = "sambamba";
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# Two commits on top of 0.6.9 release to remove undeaD submodule
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rev = "d67cf50280f7c752d815fdb50fc38fb7bb61f2c9";
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sha256 = "1skv12nx84dsxh71ixw605k6pasbjlbwiij2s9382gsw2ya6nhv7";
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fetchSubmodules = true;
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};
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installFlags = [ "prefix=$(out)" ];
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preInstall = ''
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mkdir -p "$out"/bin
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'';
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buildInputs = [
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python3
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glibc
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ldc
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which
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zlib
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];
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meta = with stdenv.lib; {
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homepage = https://github.com/lomereiter/sambamba/wiki;
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description = "Sambamba is a set of command-line tools for working with SAM/BAM file formats which are used for storing next generation sequencing (NGS) datasets.";
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platforms = platforms.all;
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license = licenses.gpl2;
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};
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enableParallelBuilding = true;
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}
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