Load Custom Files

This commit is contained in:
2025-09-11 17:04:41 -04:00
parent 4313ddd4e8
commit f18bcfd3aa
4 changed files with 191 additions and 2 deletions

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lisp/hoc-mode.el Normal file
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;;; hoc-mode.el -- mode for editing NEURON hox files
;; (setq hoc-mode-keywords "proc\\|objref\\|create\\|public\\|begintemplate\\|endtemplate\\|access\\|if\\|for")
(setq hoc-mode-highlights
'(
( "proc\\|objref\\|create\\|public\\|begintemplate\\|endtemplate\\|access\\|if\\|for" . font-lock-keyword-face)
( "[a-z0-9A-Z_]+?[ \n\t]*\\((\\)" . font-lock-function-name-face)
( "//.+" . font-lock-comment-face)
( "/\*" . font-lock-comment-start-skip)
( "\*/" . font-lock-comment-end-skip)
)
)
(define-derived-mode hoc-mode
prog-mode "hoc"
"Major mode for NEURON Hoc."
(setq comment-start "//")
(setq font-lock-defaults '(hoc-mode-highlights))
)
(provide 'hoc-mode)
;;; hoc-mode.el ends here

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lisp/nmodl.el Normal file
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(defvar nmodl-mode-hook nil)
(defvar wpdl-mode-map
(let ((map (make-keymap)))
; (define-key map "\C-j" 'newline-and-indent)
map)
"Keymap for NMODL major mode")
;;;###autoload
(add-to-list 'auto-mode-alist '("\\.mod\\'" . nmodl-mode))
(setq nmodl-keywords
'(
"NEURON"
"UNITS"
"PARAMETER"
"ASSIGNED"
"STATE"
"INITIAL"
"BREAKPOINT"
"DERIVATIVE"
"PROCEDURE"
))
(setq nmodl-neuron-keywords
'(
"TITLE"
"SUFFIX"
"POINT_PROCESS"
"RANGE"
"GLOBAL"
"POINTER"
"BBCOREPOINTER"
"USEION"
"NONSPECIFIC_CURRENT"
"SOLVE"
"METHOD"
))
(defvar nmodl-font-lock-keywords
`(
,(regexp-opt nmodl-keywords t) . 'font-lock-keyword-face
)
"Minimal highlighting expressions for NMODL mode")
(setq nmodl-font-lock-keywords
`(
(,(regexp-opt nmodl-keywords t) . 'font-lock-keyword-face)
(,(regexp-opt nmodl-neuron-keywords t) . 'font-lock-constant-face)
("^[[:space:]]*\\([[:alpha:]][[:alnum:]_]*\\)" . 'font-lock-variable-name-face)
))
(setq nmodl-syntax-rules
(syntax-propertize-rules
("TITLE\\([^\n]\\)[^\n]*\\(\n\\)" (1 "|") (2 "|"))
("\\<\\(COMMENT\\)\\>" (1 "<"))
("\\<ENDCOMMEN\\(T\\)\\>" (1 ">"))
("^[^:\n]*\\(:\\)[^\n]*\\(\n\\)" (1 "!") (2 "!"))
("\\({\\)" (1 "("))
("\\(}\\)" (1 ")"))
))
(defun nmodl-indent ()
(indent-relative-first-indent-point)
)
(defun nmodl-mode ()
"Major mode for editing Workflow Process Description Language files"
(interactive)
(kill-all-local-variables)
(setq-local font-lock-defaults '(nmodl-font-lock-keywords))
(setq-local syntax-propertize-function nmodl-syntax-rules)
(setq-local c-syntactic-indentation t)
(setq-local indent-line-function 'nmodl-indent)
;; (use-local-map wpdl-mode-map)
(setq major-mode 'nmodl-mode)
(setq mode-name "NMODL")
(run-hooks 'nmodl-mode-hook))

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lisp/ob-manim.el Normal file
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;;; ob-manim.el --- org-babel functions for manim evaluation
;; Copyright (C) David Crompton
;; Author: David Crompton
;; Keywords: manim, python, literate programming, reproducible research
;; Homepage: https://orgmode.org
;; Version: 0.01
;;; License:
;; This program is free software; you can redistribute it and/or modify
;; it under the terms of the GNU General Public License as published by
;; the Free Software Foundation; either version 3, or (at your option)
;; any later version.
;;
;; This program is distributed in the hope that it will be useful,
;; but WITHOUT ANY WARRANTY; without even the implied warranty of
;; MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
;; GNU General Public License for more details.
;;
;; You should have received a copy of the GNU General Public License
;; along with GNU Emacs; see the file COPYING. If not, write to the
;; Free Software Foundation, Inc., 51 Franklin Street, Fifth Floor,
;; Boston, MA 02110-1301, USA.
;;; Commentary:
;; This file is not intended to ever be loaded by org-babel, rather it is a
;; manim for use in adding new language support to Org-babel. Good first
;; steps are to copy this file to a file named by the language you are adding,
;; and then use `query-replace' to replace all strings of "manim" in this
;; file with the name of your new language.
;; After the `query-replace' step, it is recommended to load the file and
;; register it to org-babel either via the customize menu, or by evaluating the
;; line: (add-to-list 'org-babel-load-languages '(manim . t)) where
;; `manim' should have been replaced by the name of the language you are
;; implementing (note that this applies to all occurrences of 'manim' in this
;; file).
;; After that continue by creating a simple code block that looks like e.g.
;;
;; #+begin_src manim
;; test
;; #+end_src
;; Finally you can use `edebug' to instrumentalize
;; `org-babel-expand-body:manim' and continue to evaluate the code block. You
;; try to add header keywords and change the body of the code block and
;; reevaluate the code block to observe how things get handled.
;;
;; If you have questions as to any of the portions of the file defined
;; below please look to existing language support for guidance.
;;
;; If you are planning on adding a language to org-babel we would ask
;; that if possible you fill out the FSF copyright assignment form
;; available at https://orgmode.org/request-assign-future.txt as this
;; will make it possible to include your language support in the core
;; of Org-mode, otherwise unassigned language support files can still
;; be included in the contrib/ directory of the Org-mode repository.
;;; Requirements:
;; Use this section to list the requirements of this language. Most
;; languages will require that at least the language be installed on
;; the user's system, and the Emacs major mode relevant to the
;; language be installed as well.
;;; Code:
(require 'ob)
(require 'ob-ref)
(require 'ob-comint)
(require 'ob-eval)
;; possibly require modes required for your language
;; optionally define a file extension for this language
(add-to-list 'org-babel-tangle-lang-exts '("manim" . "tmp"))
;; optionally declare default header arguments for this language
(defvar org-babel-default-header-args:manim '())
;; This function expands the body of a source code block by doing things like
;; prepending argument definitions to the body, it should be called by the
;; `org-babel-execute:manim' function below. Variables get concatenated in
;; the `mapconcat' form, therefore to change the formatting you can edit the
;; `format' form.
(defun org-babel-expand-body:manim (body params &optional processed-params)
"Expand BODY according to PARAMS, return the expanded body."
(require 'inf-manim nil t)
(let ((vars (org-babel--get-vars (or processed-params (org-babel-process-params params)))))
(concat
(mapconcat ;; define any variables
(lambda (pair)
(format "%s=%S"
(car pair) (org-babel-manim-var-to-manim (cdr pair))))
vars "\n")
"\n" body "\n")))
;; This is the main function which is called to evaluate a code
;; block.
;;
;; This function will evaluate the body of the source code and
;; return the results as emacs-lisp depending on the value of the
;; :results header argument
;; - output means that the output to STDOUT will be captured and
;; returned
;; - value means that the value of the last statement in the
;; source code block will be returned
;;
;; The most common first step in this function is the expansion of the
;; PARAMS argument using `org-babel-process-params'.
;;
;; Please feel free to not implement options which aren't appropriate
;; for your language (e.g. not all languages support interactive
;; "session" evaluation). Also you are free to define any new header
;; arguments which you feel may be useful -- all header arguments
;; specified by the user will be available in the PARAMS variable.
(defun org-babel-execute:manim (body params)
"Execute a block of Manim code with org-babel.
This function is called by `org-babel-execute-src-block'"
(message "executing Manim source code block")
(let* ((processed-params (org-babel-process-params params))
;; set the session if the value of the session keyword is not the
;; string `none'
(session (unless (string= value "none")
(org-babel-manim-initiate-session
(cdr (assq :session processed-params)))))
;; variables assigned for use in the block
(vars (org-babel--get-vars processed-params))
(result-params (assq :result-params processed-params))
;; either OUTPUT or VALUE which should behave as described above
(result-type (assq :result-type processed-params))
;; expand the body with `org-babel-expand-body:manim'
(full-body (org-babel-expand-body:manim
body params processed-params)))
;; actually execute the source-code block either in a session or
;; possibly by dropping it to a temporary file and evaluating the
;; file.
;;
;; for session based evaluation the functions defined in
;; `org-babel-comint' will probably be helpful.
;;
;; for external evaluation the functions defined in
;; `org-babel-eval' will probably be helpful.
;;
;; when forming a shell command, or a fragment of code in some
;; other language, please preprocess any file names involved with
;; the function `org-babel-process-file-name'. (See the way that
;; function is used in the language files)
))
;; This function should be used to assign any variables in params in
;; the context of the session environment.
(defun org-babel-prep-session:manim (session params)
"Prepare SESSION according to the header arguments specified in PARAMS."
)
(defun org-babel-manim-var-to-manim (var)
"Convert an elisp var into a string of manim source code
specifying a var of the same value."
(format "%S" var))
(defun org-babel-manim-table-or-string (results)
"If the results look like a table, then convert them into an
Emacs-lisp table, otherwise return the results as a string."
)
(defun org-babel-manim-initiate-session (&optional session)
"If there is not a current inferior-process-buffer in SESSION then create.
Return the initialized session."
(unless (string= session "none")
))
(provide 'ob-manim)
;;; ob-manim.el ends here